The detailed information of tRNA gene sequence


Sequence ID>SRA1002038
Genome IDSRR001308.199264
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 149
End posion on genome 225
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
gtctctcagc
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGTACTTGGCTACGAACCAAGGGGTCGTGGGTTCGAA
TCCTGCCGGGCGCGCCA
Downstream region at tRNA end position 
gtttttcaag
Secondary structure (Cloverleaf model)
>SRA1002038	Arg	ACG
                   c      GCCA gtttttcaag
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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