The detailed information of tRNA gene sequence


Sequence ID>SRA1002040
Genome IDSRR001308.203052
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 184
End posion on genome 97
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgggccct
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCGCACGCCTGGAAAGCGTGTAAATCTGAAAGGGTT
TCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
gtagagttac
Secondary structure (Cloverleaf model)
>SRA1002040	Ser	GGA
                   t      GCtg gtagagttac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAATCTGAAAGGGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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