The detailed information of tRNA gene sequence


Sequence ID>SRA1002052
Genome IDSRR001308.213635
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 144
End posion on genome 68
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ccaccaatct
tRNA gene sequence 
CTCGTCGTAGCATAATTGGATAATGCAAAAATCTTCTACATTTTCGATTGTAAGTTCGAG
CCTTACCGACGAGGCCA
Downstream region at tRNA end position 
taccatttaa
Secondary structure (Cloverleaf model)
>SRA1002052	Arg	TCT
                   t      GCCA taccatttaa
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          C G
                    T     C A T T C     A
      T A A        A      | | | | |     G
    T       T A C G       G T A A G     C
    G       | | | |                 T T
    G       A T G C
      A T A        A     CGATT
                    A - T
                    A - T
                    A - T
                    A - T
                    T - A
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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