The detailed information of tRNA gene sequence


Sequence ID>SRA1002053
Genome IDSRR001308.214376
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 126
End posion on genome 199
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cgatcagcca
tRNA gene sequence 
TCCGGTGTCGTCCAAGGGCAGGACGGGGGACTTTGAATCCCCTAATCGGGGTTCGAATCC
CTGCACCGGAACCA
Downstream region at tRNA end position 
cgcgtctcgc
Secondary structure (Cloverleaf model)
>SRA1002053	Gln	TTG
                   a      ACCA cgcgtctcgc
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
        A A        C      | + | | |     G
      G     C C T G       C G G G G     C
      G     | | | |                 T T
      G     G G A C
        C A        G     TAAT
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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