The detailed information of tRNA gene sequence


Sequence ID>SRA1002054
Genome IDSRR001308.215059
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 148
End posion on genome 72
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cccaaagcgg
tRNA gene sequence 
GCACCCGTAGCTCAATTGGATAGAGTACCAGACTACGAATCTGGTGGTTGGAGGTTCGAT
TCCTCCCGGGTGTACCA
Downstream region at tRNA end position 
acctccgccc
Secondary structure (Cloverleaf model)
>SRA1002054	Arg	ACG
                   g      ACCA acctccgccc
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     C C T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     TGGTT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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