The detailed information of tRNA gene sequence


Sequence ID>SRA1002060
Genome IDSRR001308.218126
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 51
End posion on genome 124
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcagcgcttt
tRNA gene sequence 
TCCCGTGTAGCTCAGCCGGTAGAGCAGGTGGCTGTTAACCACCGGGTCGGGGGTTCGAGT
CCCTCCGCGGGAGCag
Downstream region at tRNA end position 
ttcgcaaggg
Secondary structure (Cloverleaf model)
>SRA1002060	Asn	GTT
                   t      GCag ttcgcaaggg
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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