The detailed information of tRNA gene sequence


Sequence ID>SRA1002064
Genome IDSRR001308.219892
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 156
End posion on genome 81
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcctgaagcg
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCGGCGGTTCGAGC
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
ccgctagaat
Secondary structure (Cloverleaf model)
>SRA1002064	Val	TAC
                   g      ACCA ccgctagaat
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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