The detailed information of tRNA gene sequence


Sequence ID>SRA1002071
Genome IDSRR001308.224726
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 117
End posion on genome 43
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ctagtatttT
tRNA gene sequence 
AAACTCTTAGCTCAATGGATAGAGCATTAGTCTTCGAAACTAGGGGCTATAGGTTCAAGT
CCTATAGAGTGTAGtt
Downstream region at tRNA end position 
tttttggtat
Secondary structure (Cloverleaf model)
>SRA1002071	Arg	TCG
                   T      AGtt tttttggtat
                     A - T
                     A   G
                     A - T
                     C - G
                     T - A
                     C - G
                     T - A          T G
                    T     T A T C C     A
      T A A        A      | | | | |     A
    G       C T C G       A T A G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GGGCT
                    T + G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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