The detailed information of tRNA gene sequence


Sequence ID>SRA1002073
Genome IDSRR001308.226070
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 240
End posion on genome 156
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnntattgag
tRNA gene sequence 
GCCCAGATGGCGGAATTGGTAGACGCGCTAGACTCAAAATCTTGTATTCGCAAGGATGTG
CAGGTTCGATTCCTGTTCTGGGCACtt
Downstream region at tRNA end position 
acaaaagccg
Secondary structure (Cloverleaf model)
>SRA1002073	Leu	CAA
                   g      ACtt acaaaagccg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T T
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATTCGCAAGGATGT
                    C - G
                    T   T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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