The detailed information of tRNA gene sequence


Sequence ID>SRA1002075
Genome IDSRR001308.226769
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 42
End posion on genome 126
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tttttgctgt
tRNA gene sequence 
CCCCAGGTGGTGGAATTGGTAGACACACTCGTTTCAGGGGCGAGCGCCTAACAGCATGCT
GGTTCGAGTCCAGTCCTGGGGACCA
Downstream region at tRNA end position 
aattttgaac
Secondary structure (Cloverleaf model)
>SRA1002075	Leu	CAG
                   t      ACCA aattttgaac
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T G A C C     A
      T A A        G      + | | | |     G
    T       G G T G       G C T G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCCTAACAGCAT
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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