The detailed information of tRNA gene sequence


Sequence ID>SRA1002080
Genome IDSRR001308.230684
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 189
End posion on genome 109
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atagagacat
tRNA gene sequence 
CAGGGCGTCGCTTAGCCTGGCCGATAGCACTTGCTTTGGGAGCAAGAATCAACGTAAGTT
CAAATCTTACCGCCCTGACCA
Downstream region at tRNA end position 
tatctttata
Secondary structure (Cloverleaf model)
>SRA1002080	Pro	TGG
                   t      ACCA tatctttata
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A T T C     A
    C C G A        C      | | | | |     A
  T         T T C G       G T A A G     C
  G           | | |                 T T
  G         T A G C
    C C G A        A     AATCAAC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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