The detailed information of tRNA gene sequence


Sequence ID>SRA1002089
Genome IDSRR001308.235334
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 201
End posion on genome 273
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
taaagcgtaa
tRNA gene sequence 
GCCGTTGTAGCTCAGCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCCCGGGTTCAAGTC
CCGGCAACGGCTCag
Downstream region at tRNA end position 
taaacaaaaa
Secondary structure (Cloverleaf model)
>SRA1002089	Thr	GGT
                   a      TCag taaacaaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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