The detailed information of tRNA gene sequence


Sequence ID>SRA1002093
Genome IDSRR001308.236250
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 217
End posion on genome 143
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaaaatagat
tRNA gene sequence 
TCTTCCTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCCAGGTTCAAG
TCCTGGAGGGAGAGCtt
Downstream region at tRNA end position 
agaaagccac
Secondary structure (Cloverleaf model)
>SRA1002093	Asn	GTT
                   t      GCtt agaaagccac
                     T - A
                     C - G
                     T - A
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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