The detailed information of tRNA gene sequence


Sequence ID>SRA1002095
Genome IDSRR001308.237659
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 239
End posion on genome 163
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattatacc
tRNA gene sequence 
GGCGGAGTAGTTTAAATGGATAAAATCCCGGCCTCATAAGCCGAAGACTACAGGTTCAAA
TCCTGTCTCCGCAACCA
Downstream region at tRNA end position 
aattaggagt
Secondary structure (Cloverleaf model)
>SRA1002095	Met	CAT
                   c      ACCA aattaggagt
                     G   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      A A A        A      | | | | |     A
    T       T T T G       A C A G G     C
    G       | | | +                 T T
    G       A A A T
      A T A        C     AGACT
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK