The detailed information of tRNA gene sequence


Sequence ID>SRA1002100
Genome IDSRR001308.241439
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 191
End posion on genome 267
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcgggaacgc
tRNA gene sequence 
GGGCTCATAGCTCAACTGGATAGAGCAAGGACCTTCTAAGTCCGAGGTTGAGGGTTCGAG
TCCTTCTGGGCCCGCCA
Downstream region at tRNA end position 
ttttcctgac
Secondary structure (Cloverleaf model)
>SRA1002100	Arg	TCT
                   c      GCCA ttttcctgac
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T G
                    T     C T T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A   G
                    G - C
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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