The detailed information of tRNA gene sequence


Sequence ID>SRA1002101
Genome IDSRR001308.241609
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 229
End posion on genome 154
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
acgcgggtga
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGAGGGTCGGCGGTTCGAGC
CCGTCATCGCCCACCA
Downstream region at tRNA end position 
tcctgctgcg
Secondary structure (Cloverleaf model)
>SRA1002101	Val	TAC
                   a      ACCA tcctgctgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK