The detailed information of tRNA gene sequence


Sequence ID>SRA1002107
Genome IDSRR001308.245748
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 75
End posion on genome 160
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggaaaaagat
tRNA gene sequence 
GGGTAGGTGCCCGAGCGGTTAAAGGGGGCAGACTGTAAATCTGCTGGCTTACGCCTACGC
TGGTTCGAACCCAGCCCTACCCACCA
Downstream region at tRNA end position 
tttcttgggg
Secondary structure (Cloverleaf model)
>SRA1002107	Tyr	GTA
                   t      ACCA tttcttgggg
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C          C A
                    T     C G A C C     A
      C G A        G      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    T       A G G G
      T A A        G     TGGCTTACGCCTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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