The detailed information of tRNA gene sequence


Sequence ID>SRA1002110
Genome IDSRR001308.246525
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 181
End posion on genome 106
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tttttaagat
tRNA gene sequence 
GCTGGAGTAGCTCAGTTGGTAGAGCAGCGGTTTTGTAAACCGCAGGTCGCGGGTTCGATT
CCCTTCTCCAGCTCCA
Downstream region at tRNA end position 
ttttttaagg
Secondary structure (Cloverleaf model)
>SRA1002110	Thr	TGT
                   t      TCCA ttttttaagg
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T T C C C     A
      T G A        A      +   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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