The detailed information of tRNA gene sequence


Sequence ID>SRA1002111
Genome IDSRR001308.247047
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 74
End posion on genome 144
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttacttttag
tRNA gene sequence 
GGGGGAATAGTTTAGTGGTAAAACCTCGGTCTTCAAAACCGATATCGTGGGTTCGATTCC
TGCTTCCTTCGaga
Downstream region at tRNA end position 
tgcaaataat
Secondary structure (Cloverleaf model)
>SRA1002111	SeC	TCA
                   g      Gaga tgcaaataat
                     G - C
                     G + T
                     G + T
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     C G T C C     A
        G A        A      | + + | |     G
      T     T T T G       G T G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        C     TATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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