The detailed information of tRNA gene sequence


Sequence ID>SRA1002112
Genome IDSRR001308.247666
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 241
End posion on genome 170
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gggctagtca
tRNA gene sequence 
GGGCGGATAGCTCAGCGGTAGAGCGTCGCCCTTACACGGCGAGGGTCACAGGTTCGAAAC
CTGTTCCGCCTAtag
Downstream region at tRNA end position 
cagtgcagtg
Secondary structure (Cloverleaf model)
>SRA1002112	Val	TAC
                   a      Atag cagtgcagtg
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          A A
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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