The detailed information of tRNA gene sequence


Sequence ID>SRA1002122
Genome IDSRR001308.257175
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 172
End posion on genome 246
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttttagttt
tRNA gene sequence 
GGCCACGTAGTTCAACGGATAGAATAGAAGTTTCCTAAACTTTAGATTCGGGTTCGATTC
CCGACGAGGCTACTA
Downstream region at tRNA end position 
aaaacaaatc
Secondary structure (Cloverleaf model)
>SRA1002122	Arg	CCT
                   t      ACTA aaaacaaatc
                     G + T
                     G - C
                     C - G
                     C - G
                     A   A
                     C - G
                     G - C          T T
                    T     A G C C C     A
      C A A        A      | | | | |     G
    G       C T T G       T C G G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    G + T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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