The detailed information of tRNA gene sequence


Sequence ID>SRA1002123
Genome IDSRR001308.257698
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 81
End posion on genome 6
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agaaagccgt
tRNA gene sequence 
GCCGCTGTAGCTCAGTCGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGACAGTTCGATT
CCGTCCAGCGGCACCA
Downstream region at tRNA end position 
agaaannnnn
Secondary structure (Cloverleaf model)
>SRA1002123	Thr	CGT
                   t      ACCA agaaannnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | | |   |     G
    C       C T C G       G A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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