The detailed information of tRNA gene sequence


Sequence ID>SRA1002124
Genome IDSRR001308.257993
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 61
End posion on genome 151
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgattgcct
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTTTAAGGTACCGCACTCGAAATGCGGCGTGCGCCTAAAGCGT
ACCGAGAGTTCGAATCTCTCCCGCTCCGCCA
Downstream region at tRNA end position 
agaaacgaag
Secondary structure (Cloverleaf model)
>SRA1002124	Ser	CGA
                   t      GCCA agaaacgaag
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | +                 T T
    T       A G G T
      T T A        A     CGTGCGCCTAAAGCGTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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