The detailed information of tRNA gene sequence


Sequence ID>SRA1002125
Genome IDSRR001308.259125
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 94
End posion on genome 170
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gtggatctct
tRNA gene sequence 
GTCGCGTTCGTCCAGACGGCTGAGGACACCGGGCTTTCATTCCGGGAACGCGGGTTCGAA
TCCCGCACGCGACTCCA
Downstream region at tRNA end position 
gatcagattc
Secondary structure (Cloverleaf model)
>SRA1002125	Glu	TTC
                   t      TCCA gatcagattc
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C G C C C     A
    C A G A        C      | | | | |     G
  G         C C T G       G C G G G     C
  G         | | | |                 T T
  C         G G A C
    T G A          A     GAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G + T
                  C       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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