The detailed information of tRNA gene sequence


Sequence ID>SRA1002126
Genome IDSRR001308.260853
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 31
End posion on genome 102
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttgataggaa
tRNA gene sequence 
GTCCATGTGGTGTAACGGGAACACACAAGATTGAAAATCTTGAGTACGCGGTTCGACTCC
GCGCATGTGACAtt
Downstream region at tRNA end position 
ttttaatact
Secondary structure (Cloverleaf model)
>SRA1002126	Phe	GAA
                   a      CAtt ttttaatact
                     G   A
                     T + G
                     C   T
                     C - G
                     A - T
                     T - A
                     G - C          T C
                    T     G C G C C     A
        A A        G      | | | | |     G
      C     T G T G       C G C G G     C
      G     | | | |                 T T
      G     A C A C
        G A        A     AGTA
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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