The detailed information of tRNA gene sequence


Sequence ID>SRA1002128
Genome IDSRR001308.261095
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 133
End posion on genome 57
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ctctgacagc
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGTATCTGGCTACGAACCAGAGGGTCGGGCGTTCGAA
TCGCTCCGGGCGCGCCA
Downstream region at tRNA end position 
tcagaccaaa
Secondary structure (Cloverleaf model)
>SRA1002128	Arg	ACG
                   c      GCCA tcagaccaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C G C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G C G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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