The detailed information of tRNA gene sequence


Sequence ID>SRA1002129
Genome IDSRR001308.261359
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 265
End posion on genome 183
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
agagcctgct
tRNA gene sequence 
GCGGCTATGGCGAAATTGGTAGACGCGACGGTTTTAGGTACCGTTGGGCAACCGTGGGGG
TTCGAGTCCCTCTAGCCGCACCA
Downstream region at tRNA end position 
atatttgttt
Secondary structure (Cloverleaf model)
>SRA1002129	Leu	TAG
                   t      ACCA atatttgttt
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGCAACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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