The detailed information of tRNA gene sequence


Sequence ID>SRA1002137
Genome IDSRR001308.268749
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 247
End posion on genome 171
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tacagtacgg
tRNA gene sequence 
GGGTCAGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTAGGTTCGAT
TCCTACCTGACCCACCA
Downstream region at tRNA end position 
gcgcgactca
Secondary structure (Cloverleaf model)
>SRA1002137	Ile	GAT
                   g      ACCA gcgcgactca
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C A T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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