The detailed information of tRNA gene sequence


Sequence ID>SRA1002140
Genome IDSRR001308.270625
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 116
End posion on genome 189
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
acaccgctag
tRNA gene sequence 
GGCCCCGTTGTGTAGCGGCCTAGCACGCCGCCCTCTCAAGGCGGTAGCGCGGGTTCGAAT
CCCGTCGGGGCTACgc
Downstream region at tRNA end position 
gcgagaacgg
Secondary structure (Cloverleaf model)
>SRA1002140	Glu	CTC
                   g      ACgc gcgagaacgg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        T      + | | | |     G
    G       T G T G       G C G G G     C
    G       + | | |                 T T
    C       G C A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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