The detailed information of tRNA gene sequence


Sequence ID>SRA1002142
Genome IDSRR001308.271114
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 173
End posion on genome 248
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttcttcgacg
tRNA gene sequence 
GCGGCTGTAGCTCAGTTGGTAGAGTCCCGGATTGTGATTCCGGTTGTCGTGGGTTCGAGC
CCCATCAGTCGCCCCA
Downstream region at tRNA end position 
gattcaacgn
Secondary structure (Cloverleaf model)
>SRA1002142	His	GTG
                   g      CCCA gattcaacgn
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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