The detailed information of tRNA gene sequence


Sequence ID>SRA1002144
Genome IDSRR001308.272310
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 177
End posion on genome 106
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ctgcacgttc
tRNA gene sequence 
GCGGATGTAGTTCAATGGCAGAACTTCAGCTTCCCAAGCTGATAGCGCGGGTTCGATTCC
CGTCATCCGCTCag
Downstream region at tRNA end position 
agagtcggct
Secondary structure (Cloverleaf model)
>SRA1002144	Gly	CCC
                   c      TCag agagtcggct
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G C C C     A
        A A        A      + | | | |     G
      T     C T T G       G C G G G     C
      G     | | | |                 T T
      G     G A A C
        C A        T     TAGC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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