The detailed information of tRNA gene sequence


Sequence ID>SRA1002153
Genome IDSRR001308.274697
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 129
End posion on genome 202
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
catcccaaat
tRNA gene sequence 
GGTCCTGTAGCTCGACGGTCGAGCATGTGGCTTTTAACCACGCGGTCTCAGTTCAATTCT
GAGCAGGGCCACCA
Downstream region at tRNA end position 
atcacaaatc
Secondary structure (Cloverleaf model)
>SRA1002153	Lys	TTT
                   t      ACCA atcacaaatc
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     G A G T C     A
        A G        A      | | | | |     A
      C     C T C G       C T C A G     C
      G     | | | |                 T T
      G     G A G C
        T C        A     CGGT
                    T + G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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