The detailed information of tRNA gene sequence


Sequence ID>SRA1002157
Genome IDSRR001308.276444
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 97
End posion on genome 172
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agcctgcaat
tRNA gene sequence 
GGCGCTTTAGCTCAGTTGGTAGAGCAGTGGCCTGAAGAGCCACGTGTCCCCAGTTCGAGT
CTGGGAGGCGCCACCA
Downstream region at tRNA end position 
gaaagtacct
Secondary structure (Cloverleaf model)
>SRA1002157	Phe	GAA
                   t      ACCA gaaagtacct
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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