The detailed information of tRNA gene sequence


Sequence ID>SRA1002158
Genome IDSRR001308.276465
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 190
End posion on genome 265
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gccccccaac
tRNA gene sequence 
GCCCAGATAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGACT
CCGTCTCTGGGCACTA
Downstream region at tRNA end position 
gaaacaagnn
Secondary structure (Cloverleaf model)
>SRA1002158	Phe	GAA
                   c      ACTA gaaacaagnn
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T C
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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