The detailed information of tRNA gene sequence


Sequence ID>SRA1002160
Genome IDSRR001308.276731
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 160
End posion on genome 234
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgtttaatat
tRNA gene sequence 
GCTCCAATCGTCCAATGGTTCGGACAGCGTCTTTTCAAGTCGAAGATGAGAGTTCAATTC
TCTCTTGGAGTACCA
Downstream region at tRNA end position 
tttttgagtg
Secondary structure (Cloverleaf model)
>SRA1002160	Glu	TTC
                   t      ACCA tttttgagtg
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     A - T          T T
                    T     C T C T C     A
      T A A        C      | | | | |     A
    G       C C T G       G A G A G     C
    G       | | | |                 T T
    T       G G A C
      T C          A     AGAT
                    G   A
                    C - G
                    G - C
                    T   T
                    C - G
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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