The detailed information of tRNA gene sequence


Sequence ID>SRA1002164
Genome IDSRR001308.280732
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 70
End posion on genome 154
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tctacccctt
tRNA gene sequence 
GCCCGGGTGGTGGAATGGTAGACACGAAGGACTTAAAATCCTTTTCCTTCTAGGAGTACG
GGTTCAAGTCCCGTCCTGGGCACCA
Downstream region at tRNA end position 
cagtaattca
Secondary structure (Cloverleaf model)
>SRA1002164	Leu	TAA
                   t      ACCA cagtaattca
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T A A        G      | | | | |     A
    G       G G T G       A C G G G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TTCCTTCTAGGAGT
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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