The detailed information of tRNA gene sequence


Sequence ID>SRA1002179
Genome IDSRR001308.290020
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 67
End posion on genome 143
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgcgacga
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTTGGTTCAAG
TCCAACACGGCCTACCA
Downstream region at tRNA end position 
ccttccaaga
Secondary structure (Cloverleaf model)
>SRA1002179	Met	CAT
                   a      ACCA ccttccaaga
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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