The detailed information of tRNA gene sequence


Sequence ID>SRA1002182
Genome IDSRR001308.291037
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 170
End posion on genome 85
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gttcacctta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTAATGGCAGCAGACTGTAAATCTGCCCTCTTACGAGTACGC
TGGTTCGAATCCAGCCCTCTCCACCA
Downstream region at tRNA end position 
cgtgatgcgc
Secondary structure (Cloverleaf model)
>SRA1002182	Tyr	GTA
                   a      ACCA cgtgatgcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     CCTCTTACGAGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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