The detailed information of tRNA gene sequence


Sequence ID>SRA1002184
Genome IDSRR001308.292521
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 105
End posion on genome 190
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttatatcT
tRNA gene sequence 
GGAGAGGTACCGAAGCGGTCATAACGGCGCCGTCTCGAAAGCGGATGGGCGTAAGCCACG
TGGGTTCGAATCCCACCCTCTCCGAat
Downstream region at tRNA end position 
ttttgaggaa
Secondary structure (Cloverleaf model)
>SRA1002184	Ser	CGA
                   T      GAat ttttgaggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGGCGTAAGCCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    T + G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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