The detailed information of tRNA gene sequence


Sequence ID>SRA1002187
Genome IDSRR001308.294441
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 143
End posion on genome 71
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tctaaattaa
tRNA gene sequence 
AGAAGTGTAGCCAAGTGGTAAGGCAGTGGTTTTTGAAGCCATCATGCGTAGGTTCGAATC
CTACCACTTCAACat
Downstream region at tRNA end position 
cgacatatag
Secondary structure (Cloverleaf model)
>SRA1002187	Gln	TTG
                   a      ACat cgacatatag
                     A   A
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     A C C G       G T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGC
                    G + T
                    T - A
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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