The detailed information of tRNA gene sequence


Sequence ID>SRA1002194
Genome IDSRR001308.297915
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 142
End posion on genome 230
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
caaacacctT
tRNA gene sequence 
GTCCGGGTGGCGGAATGGCAGACGCGCTAGCTTGAGGTGCTAGTGCCCTATTAACGGGCG
TGGGGGTTCAAGTCCCCCTCGGACACCA
Downstream region at tRNA end position 
ccgagaaaat
Secondary structure (Cloverleaf model)
>SRA1002194	Leu	GAG
                   T      ACCA ccgagaaaat
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          G A
                    T     C C C C T     A
      T A A        G        | | | +     C
    G       G G C G       T G G G G     T
    G         | | |                 G T
    C       A C G C
      A G          G     TGCCCTATTAACGGGCG
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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