The detailed information of tRNA gene sequence


Sequence ID>SRA1002195
Genome IDSRR001308.298410
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 250
End posion on genome 166
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnnncgga
tRNA gene sequence 
GCCCCGGTGGCGAAATTGGTAGACGCGCGGGATTCAAAATCCCGTTCCGCGAGGAGTGTC
GGTTCGATTCCGACCTGGGGCACCA
Downstream region at tRNA end position 
tcaatcagct
Secondary structure (Cloverleaf model)
>SRA1002195	Leu	CAA
                   a      ACCA tcaatcagct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T
                     G - C          T T
                    T     C A G C C     A
      T A A        G      | | | | |     G
    T       A G C G       G T C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCCGCGAGGAGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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