The detailed information of tRNA gene sequence


Sequence ID>SRA1002196
Genome IDSRR001308.298446
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 96
End posion on genome 173
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctgaacctac
tRNA gene sequence 
GCCCTGTTGGCCGAGTGGTTAATGGCACCTGCCTTGTAAGCAGCGACTTCGAGTGTTCGA
TTCACTCACAGGGCACCA
Downstream region at tRNA end position 
catgaaagac
Secondary structure (Cloverleaf model)
>SRA1002196	Thr	TGT
                   c      ACCA catgaaagac
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     C T C A C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G T G     C
    G       + | | |                 T T
    T       T G G C
      T A A        A     GACTTC
                    C   C
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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