The detailed information of tRNA gene sequence


Sequence ID>SRA1002200
Genome IDSRR001308.300594
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 185
End posion on genome 260
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acggttcgcg
tRNA gene sequence 
GTGGCTGTAGCTCAGTTGGTAGAGTCCAGGATTGTGATTCCTGTTGTCGTGGGTTCGAGC
CCCATCAGCCACCCCA
Downstream region at tRNA end position 
gtgnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002200	His	GTG
                   g      CCCA gtgnnnnnnn
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          C     TTGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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