The detailed information of tRNA gene sequence


Sequence ID>SRA1002201
Genome IDSRR001308.302546
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 126
End posion on genome 199
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccattacat
tRNA gene sequence 
CGCGGGATAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCGAGT
CCTGTTCCCGCTACac
Downstream region at tRNA end position 
tttaaaagcc
Secondary structure (Cloverleaf model)
>SRA1002201	Met	CAT
                   t      ACac tttaaaagcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       A C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK