The detailed information of tRNA gene sequence


Sequence ID>SRA1002204
Genome IDSRR001308.303049
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 192
End posion on genome 108
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggtttgtttc
tRNA gene sequence 
GGAGGGGTTCCCGAGCGGTCAAAGGGATCAGACTGTAAATCTGACGGCTCTGCCTTCGAA
GGTTCGAATCCTTCCCCCTCCACCA
Downstream region at tRNA end position 
tattttgtat
Secondary structure (Cloverleaf model)
>SRA1002204	Tyr	GTA
                   c      ACCA tattttgtat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     CGGCTCTGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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