The detailed information of tRNA gene sequence


Sequence ID>SRA1002205
Genome IDSRR001308.303262
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 217
End posion on genome 141
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
caacccgaaa
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGTCGGGGGTTCGAA
CCCCTCATCGCCCACCA
Downstream region at tRNA end position 
cttttaaata
Secondary structure (Cloverleaf model)
>SRA1002205	Val	TAC
                   a      ACCA cttttaaata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     C T C C C     A
    T C G A        A      | + | | |     G
  G         C T C G       G G G G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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