The detailed information of tRNA gene sequence


Sequence ID>SRA1002209
Genome IDSRR001308.305414
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 84
End posion on genome 9
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acggtcacaa
tRNA gene sequence 
AGGGGCGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCAAGT
CCTGTCGCCCCTGCCC
Downstream region at tRNA end position 
tggactgtnn
Secondary structure (Cloverleaf model)
>SRA1002209	Trp	CCA
                   a      GCCC tggactgtnn
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      C A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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