The detailed information of tRNA gene sequence


Sequence ID>SRA1002212
Genome IDSRR001308.306514
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 141
End posion on genome 217
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccacccgtgt
tRNA gene sequence 
AGGGGAGTCGCCAAGTTGGTTAAGGCACTGGATTTTGATTCCAGCATGCGAAGGTTCGAA
TCCTTCCTCCCCTGCCA
Downstream region at tRNA end position 
aacctgccct
Secondary structure (Cloverleaf model)
>SRA1002212	Gln	TTG
                   t      GCCA aacctgccct
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T T C C     A
      T G A        C      | | | | |     G
    T       A C C G       G A A G G     C
    G         | | |                 T T
    G       A G G C
      T T A        A     CATGC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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