The detailed information of tRNA gene sequence


Sequence ID>SRA1002216
Genome IDSRR001308.308319
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 137
End posion on genome 211
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttcttttatc
tRNA gene sequence 
GCTCTGATAGTTCAATGGACAGAACAAGGCACTCCTAAGGCTTAGATGTAGGTTCGATTC
CTACTCAGGGCACAA
Downstream region at tRNA end position 
catgtccaga
Secondary structure (Cloverleaf model)
>SRA1002216	Arg	CCT
                   c      ACAA catgtccaga
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A
                     G - C
                     A - T          T T
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       C T T G       G T A G G     C
    G       | | | |                 T T
    A       G A A C
      C A          A     AGAT
                    A - T
                    G + T
                    G - C
                    C - G
                    A   G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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